Package: SigBridgeRUtils 0.2.6

SigBridgeRUtils: Some Utilities & Base Supports for 'SigBridgeR'

Provides fundamental function support for 'SigBridgeR' and its single-cell phenotypic screening algorithm, including optional functions.

Authors:Yuxi Yang [cre, aut]

SigBridgeRUtils_0.2.6.tar.gz
SigBridgeRUtils_0.2.6.zip(r-4.7)SigBridgeRUtils_0.2.6.zip(r-4.6)SigBridgeRUtils_0.2.6.zip(r-4.5)
SigBridgeRUtils_0.2.6.tgz(r-4.6-any)SigBridgeRUtils_0.2.6.tgz(r-4.5-any)
SigBridgeRUtils_0.2.6.tar.gz(r-4.7-any)SigBridgeRUtils_0.2.6.tar.gz(r-4.6-any)
SigBridgeRUtils_0.2.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
SigBridgeRUtils/json (API)

# Install 'SigBridgeRUtils' in R:
install.packages('SigBridgeRUtils', repos = c('https://exceret.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.70 score 487 downloads 34 exports 23 dependencies

Last updated from:478226b616. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK120
source / vignettesOK174
linux-release-x86_64OK138
macos-release-arm64OK201
macos-oldrel-arm64OK213
windows-develOK93
windows-releaseOK147
windows-oldrelOK80
wasm-releaseOK106

Exports:%||%AddCaller2cliAddMiscAddTimeStamp2cliall_identicalCol2RownamescolMeans3colMedians3colQuantiles3colSds3colSums3colVars3CreateCallerCliEnvCreateTimeStampCliEnvFilterArgs4FuncGetCallerInfoGetFuncArgsgetFuncOptionGetPythonPathginv2ListPyEnvMatchArgMatchFunc2Argsnormalize.quantilesrowMaxs3rowMeans3rowMedians3Rownames2ColrowSds3rowSums3rowVars3setFuncOptionSetupPyEnvTimeStamp

Dependencies:chkclidata.tableglueherejsonlitelatticelifecyclemagrittrMatrixpngprocessxpspurrrR6rappdirsRcppRcppTOMLreticulaterlangrprojrootvctrswithr

Readme and manuals

Help Manual

Help pageTopics
A Decorator for Adding Caller Info to CLI FunctionsAddCaller2cli
Safely Add Miscellaneous Data to Seurat ObjectAddMisc
A Decorator for Adding Timestamp to CLI FunctionsAddTimeStamp2cli
Check all the Objects Are Identicalall_identical
Create Environment with Caller-Aware CLI FunctionsCreateCallerCliEnv
Create Environment with Timestamped CLI FunctionsCreateTimeStampCliEnv
Keep Wanted Arguments According to A Function from DotsFilterArgs4Func
Get Caller NameGetCallerInfo
Get Python Executable PathGetPythonPath
Generalized Inverse (Moore-Penrose Inverse)ginv2 ginv2.default
List Available Python EnvironmentsListPyEnv ListPyEnv.conda ListPyEnv.default ListPyEnv.venv
Argument Matching with Default FallbackMatchArg
Match Functions to Argument ListMatchFunc2Args
Matrix Statistics Functions (Not Necessarily)colMeans3 colMedians3 colQuantiles3 colSds3 colSums3 colVars3 matrix-stats normalize.quantiles rowMaxs3 rowMeans3 rowMedians3 rowSds3 rowSums3 rowVars3
Null Coalescing Operator%||% NULL_or
Row Name UtilitiesCol2Rownames rowname-utils Rownames2Col
Create or Use Python Environment with Required PackagesSetupPyEnv SetupPyEnv.default
Setup Conda Python EnvironmentSetupPyEnv.conda
Setup Virtual Environment (venv)SetupPyEnv.venv
Configuration Functions for SigBridgeR PackagecheckFuncOption getFuncOption setFuncOption SigBridgeR_Function_Setting
Generate Timestamp StringTimeStamp